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Life sciences · Preprint
arXiv · September 29, 2026
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Certo is a small non-generative decision model (Qwen3-4B): it scores candidate actions from their text and returns a probability, instead of generating an answer. The accurate design reads the state, the rules, and each candidate together (a joint scorer), so cost grows with the menu. Independent encoding lets each candidate be encoded once and reused across states (about 5x cheaper at 77 candidates), but separates state from candidate. We ask how much rule-sensitivity survives that move, and whether it can be trained back. Four experiments on Certo: (1) the tested conversion to cacheable scoring loses rule-sensitivity (recall@1 1.00 -> 0.24) while the joint scorer holds 1.00, and a shortlist+rerank rescue fails; (2) targeted counterfactual supervision restores strong performance on held-out synthetic rule tasks (paraphrase, counterfactual, composition; reproducible across seeds), though we do not isolate whether predictions depend on the supplied rule; (3) on real rules the added benefit is not established -- after fixing a truncation confound, the joint scorer wins significantly on the short tier (0.861 vs 0.500) and directionally on the hard tier (0.655 vs 0.483, n=29); (4) a matched cross-domain real-prose mixture did not help and reduced contract accuracy (-9.3, -16.2 points). A cacheable encoder can be made rule-sensitive on its training distribution, but transfer to unseen-source real rules is not established; the joint scorer keeps an edge at the cost of caching.